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COMP26120 Lab Exercise 5: The 0/1 Knapsack Problem

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UKUniversity of ManchesterCOMP26120Algorithms and Imperative ProgrammingThe 0/1 Knapsack ProblemJava

COMP26120 Academic Session: 2022-23 CourseNana.COM

Lab Exercise 5: The 0/1 Knapsack Problem

Duration: 3 weeks You should do all your work in the lab5 directory of the COMP26120 2022 repository - see Blackboard for further details. You will need to make use of the existing code in the branch as a starting point. CourseNana.COM

Important: You submit this lab via a quiz on Blackboard. This will: CourseNana.COM

  1. Ask you some questions about your implementation, including the hash and tag of the commit you want us to mark (see below for details of this).
  2. Ask you to upload a zip file of the python, c or java folder you have been working in.
  3. Ask you to upload PDF reports of the experiments you will run in Part 3 of this lab (one report for each experiment)

You can save your answers and submit later so we recommend filling in the questions for each part as you complete it, rather than entering everything at once at the end. CourseNana.COM

NB: We have made some changes to this lab since the start of semester 1 in the hopes it will be quicker to mark. If you want a helper script for generating input for experiments and a LaTeX template for the report that reflects how it should be structured now, please pull from upstream: CourseNana.COM

You can do this by typing the following commands in your gitlab directory: git remote remove upstream git remote add upstream ... git fetch upstream git merge upstream/master CourseNana.COM

Code Submission Details

You have the choice to complete the lab in C, Java or Python. Program stubs for this exercise exist for each language. Only one language solution will be marked. CourseNana.COM

Because people had a number of issues with GitLab last year we are going to take a multiple redundancy approach to submission of code. This involves both pushing and tagging a commit to GitLab and uploading a zip of your code to Blackboard. By preference we will mark the code you submitted to GitLab but if we can’t find it or it doesn’t check out properly then we will look in the zip file on Blackboard. Please do both to maximise the chance that one of them will work. CourseNana.COM

When you submit the assignment through Blackboard you will be asked for the hash and tag of the commit you want marked. This is to make sure the TAs can identify exactly which GitLab commit CourseNana.COM

Figure 1: Identifying the hash of your most recent commit in GitLab CourseNana.COM

Figure 2: Identifying the hashes of previous commits in GitLab CourseNana.COM

you want marked. You tag a commit lab5 solution (we recommend you use this tag, but you do not have to) by typing the following at the command line: CourseNana.COM

git tag lab5_solution git push git push origin lab5_solution CourseNana.COM

You can find the hash of your most recent commit by looking in your repository on GitLab as shown in figure 1. CourseNana.COM

You can also find the hash for a previous commit by clicking on the “commits” link and then identifying the commit you are interested in. This is shown in figure 2. CourseNana.COM

Note that while the full hash for commits are quite long, we only need the first 8 characters (as shown in the screenshots) to identify for marking. CourseNana.COM

Reminder: It is bad practice to include automatically generated files in source control (e.g. your git repositories). This applies to object files (C), class files (Java), and compiled bytecode files (Python). It’s not fatal if you do this by mistake, but it can sometimes cause confusions while marking. CourseNana.COM

While it is fine to discuss this coursework with your friends and compare notes, the work submitted should be your own. In particular this means you should not have copied any of the source code, or the report. We will be using the turnitin tool to compare reports for similarities. CourseNana.COM

Learning Objectives

By the end of this lab you should be able to: • To explain the 0/1 Knapsack problem and Fractional Knapsack problem. • To implement a number of exact techniques for solving the 0/1 Knapsack problem. • To implement one inexact technique - or heuristic - for finding good but not necessarily optimal solutions to the 0/1 Knapsack problem. • To evaluate and compare running times of these techniques. • To devise experiments to investigate factors that make Knapsack problems hard for various solution techniques. CourseNana.COM

Introduction

In this section we introduce two related ‘Knapsack’ problems. CourseNana.COM

The 0/1 Knapsack Problem and Logistics Suppose an airline cargo company has 1 aeroplane which it flies from the UK to the US on a daily basis to transport some cargo. In advance of a flight, it receives bids for deliveries from (many) customers. CourseNana.COM

Customers state CourseNana.COM

• the weight of the cargo item they would like to be delivered; • the amount they are prepared to pay. CourseNana.COM

The company must choose a subset of the packages (bids) to carry in order to make the maximum possible profit, given the total weight limit that the plane is allowed to carry. CourseNana.COM

In mathematical form the problem is: Given a set of N items each with weight wi and value vi , for i = 1 to N , choose a subset of items (e.g. to carry in a knapsack, or in this case an aeroplane) so that the total value carried is maximised, and the total weight carried is less than or equal to a given carrying capacity, C. As we are maximising a value given some constraints this is an optimisation problem. CourseNana.COM

This kind of problem is known as a 0/1 Knapsack problem. A Knapsack problem is any problem that involves packing things into limited space or a limited weight capacity. The problem above is “0/1” because we either do carry an item: “1”; or we don’t: “0”. Other problems allow that we can take more than 1 or less than 1 (a fraction) of an item. Below is a description of a fractional problem. See the description in Algorithm Design and Applications, p. 498. or the briefer description in Introduction to Algorithms, p. 417. CourseNana.COM

An Enumeration Method for solving 0/1 Knapsack

A straightforward method for solving any 0/1 Knapsack problem is to try out all possible ways of packing/leaving out the items. We can then choose the most valuable packing that is within the weight limit. For example, consider the following knapsack problem instance: CourseNana.COM

Sample Inpuy
3
1 5 4
2 12 10
3 8 5
11

The first line gives the number of items; the last line gives the capacity of the knapsack; the remaining lines give the index, value and weight of each item e.g. item 2 has value 12 and weight 10. The full enumeration of possible packings would be as follows: CourseNana.COM

Items Packed Value Weight Feasible?
000 0 0 Yes
001 8 5 Yes
010 12 10 Yes
011 20 15 No
100 5 4 Yes
101 13 9 Yes OPTIMAL
110 17 14 No
111 25 19 No

The items packed column represents the packings as a binary string, where “1” in position i means pack item i, and 0 means do not pack it. Every combination of 0s and 1s has been tried. The one which is best is 101 (take items 1 and 3), which has weight 9 (so less than C = 11) and value 13. We can also represent a solution as an array of booleans (this approach is taken in the Java and Python stubs). CourseNana.COM

Some vocabulary • A solution: Any binary or boolean array of length N is referred to as a packing or a solution; This only means it is a correctly formatted instruction of what items to pack. • A feasible solution: A solution that also has weight less than the capacity C of the knapsack. • An optimal solution: The best possible feasible solution (in terms of value). • An approximate solution: Only a high value solution, but not necessarily optimal. In this lab we will investigate some efficient ways of finding optimal solutions and approximate solutions. CourseNana.COM

Description

This lab asks you to implement four different solutions to the 1/0 Knapsack problem over three weeks. We have provided partial solutions and it is your job to complete them. CourseNana.COM

Important Note 1: The C support code represents Knapsack solutions as a bitstring (an array of 0s or 1s) indicating whether an items should (1) or should not (0) be packed into the knapsack. The Java and Python code represent solutions as arrays of booleans (True and False). The Java and Python support code, converts the boolean values to 0 or 1 for printing so there can be a uniform presentation of results. In what follows we will sometimes use T as shorthand for True and F as shorthand for False. CourseNana.COM

Important Note 2: In the input files, items for the Knapsack are numbered from 1 to N. The support functions read these into arrays of size N+1 (one for item weights, one for item values and one to map the index of the item in the input file to that in a sorted array (for the algorithms where sorting by value/weight ratios is useful)). These arrays all have a null or None value (depending on language) as the 0th element of the array. In this way the array indices match up with the numbering in the input files, but it does mean that functions and methods working with these arrays have to account for the irrelevant 0th element. This is easier in C where you can simply pass a pointer to the element of the array at position 1 than in Python or Java where you need to start any iterations etc., explicitly at element 1. CourseNana.COM

Task 1a: Full Enumeration

Time Budget: Task 1a is primarily intended to help you familiarise yourself with the input files and running the knapsack program. You should not spend more than an hour on this task and it is not needed for later tasks in this coursework. If you are stuck on this for some reason but are confident that you understand how our input files work, how problems are represented internally in the program and how the program can be run, then we would recommend you move on to the rest of this coursework after an hour. CourseNana.COM

We have provided an implementation of the enumeration method for the Knapsack problem in each language. You can (compile, if necessary, and) run this program on data/easy.20.txt. The program enumerates the value, weight and feasibility of every solution and prints them to the screen. However, it does not “remember” the best (highest value) feasible solution or display it at the end. CourseNana.COM

  1. Adapt the code so that it does that. NB. on data/easy.20.txt this should compute a solution value of 377.
  2. It would also be useful to display how much of the enumeration has been done – like a progress bar. Add code to the enumeration loop to print out the fraction of the enumeration that is complete and the value of the current best solution. Note: If you update the progress bar too often it will slow you down a lot. You may want to think about how often you update it if you want a more efficient program.

You may change the value of the QUIET variable to suppress output to the screen and make the code run faster. CourseNana.COM

Running on our Example Inputs

In the data directory you will find four files: easy.20.txt easy.200.txt hard.200.txt hard.2000.txt In each case the number in the file name (20, 200, 2000) indicates how many items the example wants you to put into the knapsack. Your enumeration algorithm will probably only manage to solve the 20 item knapsack. The correct optimal answers for the problems are 377 (easy.20.txt), 4077 (easy.200.txt), 126968 (hard.200.txt), 1205259 (hard.2000.txt). 5 CourseNana.COM

Blackboard Submission

Once you have completed this implementation you should look at the Blackboard submission form where you will be asked the following question about Part 1a. CourseNana.COM

  1. When you ran your enumeration solution on data/easy.20.txt (no more than 100 words): (a) How long did it take to run? You can use the Unix time utility for this. It is fine to just report the real time from this function. (b) What did value did it report as the maximal possible knapsack value? (c) What was the difference between the reported value and the optimal value (377)? (NB. The answer to this will be 0 if your implementation returned the optimal solution). For instance, if your code took 20.34 seconds to run and reported a maximal possible knapsack value of 374. I would expect to see here something like: easy.20.txt: 20.34s, reported value: 374, difference to optimal:3

Task 1b: Dynamic Programming

Time Budget: Task 1b is the key task in this coursework and you will need it working for your report. The intention is that task 1b should take you 1-2 hours to complete. Dynamic programming can sometimes be a bit fiddly so you might want to budget this time to include one of the drop-in sessions so you can access TA help if necessary. If you are going over 3 hours it might be worth “borrowing” some of the time allowed for later parts of the coursework, but you might want to look ahead, check out the marking scheme, and think about where you can best spend time. CourseNana.COM

Unlike the enumeration approach (which generated all possible solutions and picks the best), dynamic programming approaches iteratively compute the solution to larger and larger subproblems using the results of smaller subproblems until we have the solution to the overall problem. Complete the program that solves the 0/1 Knapsack Problem by dynamic programming. Using the program stubs and support files we provide for you. CourseNana.COM

The Dynamic Programming Solution

There is a detailed explanation of the dynamic programming approach to the 0/1 Knapsack Problem with examples on p. 343-345 of Algorithm Design and Applications. In brief the solution is as follows: CourseNana.COM

Identify sub-problems in a tabular form We will use a two dimensional array, V , for our subproblems. V [i][w] is the maximum value we can achieve with the first ‘i’ items in our input list using at most weight ‘w’. If we have a list of N items and a capacity of C, then if we can compute all values in the array V the value at V [N ][C] will contain the optimal value of the items can can fit into our aeroplane. CourseNana.COM

Initialise the array If we have no items then our optimal value is 0, so V [0][w] = 0 for all 0 ≤ w ≤ C. All other values in the array we initialise with null or None (depending upon the language). Recursive Step The maximum value we can make with the first i items and a weight limit of w, where the value of the ith item is vi and the weight of the ith item is wi is either: CourseNana.COM

  1. The maximum value we could make with the first i − 1 items (ignoring the ith item), or
  2. The maximum value we could make by adding the value of the ith item, vi , to the maximum value we could make using the first i − 1 items and a maximum weight of w − wi . This is V [i][w] = max(V [i − 1][w], vi + V [i − 1][w − wi ]) for 1 ≤ i ≤ N, 0 ≤ w ≤ C.

The table V just tells us the best value we can get after considering i items it doesn’t tell us which ones we added. We can update the algorithm to keep track of this information by using an auxilliary array, keep where keep[i][w] records whether the ith item is used in the maximal solution for V [i][w]. CourseNana.COM

If keep[i][w] = 0 then we know that the ith item has been ignored and this maximal solution has been constructed from the maximal solution for V [i − 1][w] so we should use keep[i − 1][w] to find out which other items are included. If keep[i][w] = 1 then we know that the ith item has been included and this maximal solution has been constructed from the maximal solution for V [i − 1][w − wi ] so we should use keep[i − 1][w − wi ] to find out which other items are included. The following pseudo-code outlines the complete solution CourseNana.COM

KnapSack(v, w, N, C) {
for (w = 0 to C) V[0][w] = 0
for (i = 1 to N)
for (w = 0 to C)
if (w[i] <= w) and (v[i] + V[i - 1][w - w[i]] > V[i - 1, w]) {
V[i][w] = v[i] + V[i - 1][w - w[i]]
keep[i][w] = 1
} else {
V[i][w] = V[i - 1][w]
keep[i][w] = 0
}
K = C
for (i = N downto 1)
if (keep[i][K] == 1) {
output i
K = K - w[i]
}
return V[N, C]

You may want to run a few simple examples of the algorithm by hand to check you understand how it works. For instance, how does it behave with the following four items: CourseNana.COM

i 1 2 3 4
vi 10 40 30 50
wi 4 6 3 5

Implementing and Testing the Dynamic Programming Solution

You can find further instructions for approach to this in dp.c/dp kp.java/dp kp.py file (depending upon which language you are using). If you wish, you may ignore these program stubs and implement your own dynamic programming approach to the 0/1 Knapsack problem. Test your code on the instance file, data/easy.20.txt. You should get the same answer as with the enum program. CourseNana.COM

Try the harder problems in the data directory. If interested, and you have time, you might want to investigate the space and time complexity of your solution. CourseNana.COM

  1. Run your dynamic programming solution on the four files in the data directory, killing it if it runs for more than 60 seconds. Then answer the questions below for each of the four files (no more than 100 words in total): (a) Did the run complete in under 60s? If so, how long did it take to run? You can use the Unix time utility for this. It is fine to just report the real time from this function. (b) Did it report a value as a possible knapsack value when it finished running or you killed it? If so what was that value? (c) If it reported a value, what was the difference between this and optimal value for that problem (See the end of Task 1a for a list of the optimal values)?

I would expect to see here something like: CourseNana.COM

easy.20.txt: 20.34s, reported value: 374, difference to optimal:3 easy.200.txt: 35.5s, reported value: 4077, difference to optimal:0 hard.200.txt: killed, reported value: none, difference to optimal: not applicable hard.2000.txt: killed, reported value: none, difference to optimal: not applicable CourseNana.COM

  1. How does your implementation of dynamic programming work. Illustrate this with the part of your code that is equivalent to lines 3-11 of the pseudocode we have given above. In particular, explain in your own words, the role of your equivalent of the arrays V and keep in your implementation. (no more than 300 words, not including code snippet) You should be here by the end of week 1 of this lab.

Task 2a: Fractional Knapsack Bound

Time Budget: Tasks 2a and 2b, taken together, are intended to take between 1 and 2 hours to complete. They are not needed for any other part of this lab. If you have spent more than two hours on Part 2 we recommend proceeding to tasks 3a and 3b. Imagine we have decided we definitely want to pack some particular items, and definitely don’t want to pack some particular other ones. For the remaining items we are not sure yet. We can represent this situation as 001110 or FFTTTF CourseNana.COM

where 0 or F (False) means definitely won’t take the item, 1 or T (True) means definitely will, and * means don’t know. We call these partial solutions. CourseNana.COM

In the bnb.c/bnb kp.java/bnb kp.py code, we have already provided an almost complete function frac bound() which accepts a partial solution of the form 01101** (C) or FTTFT** (Java/Python) as input and does the following things: CourseNana.COM

1. Checks the feasibility of the partial solution and sets the solution value to -1 if it is infeasible, and returns. CourseNana.COM

  1. If the partial solution is feasible then its value is calculated, i.e. the value of the items already packed, and the value is updated
  2. If the partial solution is feasible then its upper bound is also computed and updated. Make sure you understand this frac bound() function and complete it by filling in the two missing lines.

Task 2b: Branch-and-Bound

The branch and bound approach was covered in lectures as a backtracking method for optimisation problems. You should also see pages 521-524 of Algorithm Design and Applications. CourseNana.COM

Let’s consider how we might, as people, solve the 0/1 knapsack problem. We would try the ‘best’ item first (e.g. the one with the highest value-to-weight ratio) and see if we can fit the best items in. This is also a reasonable approach for a computer e.g. to sort the items in descending order of value-to-weight ratio, and add items in that order until the knapsack is full. However, we might realise that putting that really big item in the bag means there is left over space and putting two smaller items in would have been better i.e. we back-track by removing an item and trying something else. We get computers to do the same thing when systematically exploring the search space. CourseNana.COM

In order to prevent us backtracking through every possible solution, we can “prune” off parts of the set of the solutions we know cannot contain a feasible/optimal solution. If we know that a particular subset of items is heavier than the capacity, we do not need to consider any solutions that use that subset. Similarly, if we know that not including a particular item (e.g. the first item) the best we can do is value vupper , and we have already found a solution better than vupper , then we no longer have to consider any solution that does not contain that crucial item. CourseNana.COM

You must now use the frac bound() function to complete the branch-and-bound implementation. The outline of the algorithm can be given as follows (see Algorithm Design and Applications for more details). CourseNana.COM

  1. Sort the items by decreasing value-to-weight ratio.
  2. Compute the upper bound of the solution ****...
  3. Compute the current values of each of the two solutions 0... (or F...) and 1... (or T...) (i.e. the total value of all the 1/Ts in each string), also their upper bound values, and check they are feasible.
  4. If they are feasible we place them on a priority queue (Note we have provided implementations of a priority queue for all three languages).

Complete the branch and bound function given in bnb.c/bnb kp.java/bnb kp.py. This will call the fractional knapsack bound function frac bound() and use the priority queue functions provided. More instructions are given in the code files. CourseNana.COM

When testing branch-and-bound you should consider stopping the program early if it is taking too long and think about how close the current best solution is to the actual optimal solution. Note that if you wait long enough you might hit the capacity of the priority queue – this probably indicates that you should give up trying to find an exact solution with branch-and-bound, although you can try making the queue larger. CourseNana.COM

Blackboard Submission

Once you have completed this implementation (or got as far as you can with it) you should look at the Blackboard submission form where you will be asked the following question about Part 2. ... CourseNana.COM

Task 3a: Greedy Algorithm

Time Budget: Task 3a is intended to take less than half an hour to complete. It is not needed elsewhere in the lab and should be abandoned if time is running out. The greedy algorithm is very simple. It sorts the items in decreasing value-to-weight ratio. Then it adds them in one by one in that order, skipping over any items that cannot fit in the knapsack, but continuing to add items that do fit until the last item is considered. There is no backtracking to be done. CourseNana.COM

Write your own greedy algorithm in greedy.c/greedy kp.java/greedy kp.py. Note that we have provided a sort by ratio function/method (you should have encountered this when implementing the branch-and-bound solution). CourseNana.COM

Blackboard Submission ... CourseNana.COM

Task 3b: What makes a Knapsack problem Hard for Dynamic Programming?

Time Budget: Task 3b is intended to take 1-3 hours to complete. Please bear this in mind when investing time trying to figure out what happened if you do not get the results you expected. CourseNana.COM

Generating Data

To help with experiments we have supplied a python script called kp generate.py which will automatically generate knapsack instance files for you. It takes four arguments: CourseNana.COM

  1. The first argument is the number of items you want to put in the knapsack
  2. The second argument is the capacity of the knapsack
  3. The third argument is an upper bound on the profit and weight of each item – the script will randomly generate values for profit and weight between 1 and this number.
  4. The fourth argument is the name of the output file. So, for instance if you call the script from the command line with python3 kp_generate.py 5 6 7 test.txt

It will generate a file called test.txt whose contents will look something like: CourseNana.COM

Feel free to adapt and modify this script for your own use. CourseNana.COM

NOTE: This file isn’t in the original lab5 folder. You will need to pull from upstream to get it. See the instructions on Blackboard and at the start of this document. CourseNana.COM

The Experiment

Obviously Knapsack problems get harder to solve the more potential items there are to put into the Knapsack, but that’s not the only factor. CourseNana.COM

Construct an experiment to explore what else (beyond number of items) makes a knapsack problem hard for dynamic programming and write this up in your report. Think about how the theoretical complexity for dynamic programming is computed and what factors are considered in that analysis. CourseNana.COM

Your write up should have the following sections: • a hypothesis stating what aspect of a knapsack problem not counting the number of items might make the problem harder for a dynamic programming solution with a brief explanation why. Ideally this should say how you think this factor will affect the running time of your implementation. • a design which should cover the following points with justifications where necessary: CourseNana.COM

  1. What variable will you change across runs of the program?
  2. How did you create inputs that changed this variable? Did you use multiple inputs for each potential value of the variable?
  3. What did you measure and how?

Please make these three things as clear as possible to see in your report. This will speed up marking and reduce the chance that your marker misses a point. • a results section which should include a table or graph of your results, a description of any processing such as computing averages that took place, and the formulae used to generate any best fit lines that are shown. • a discussion section that states whether your results support your hypothesis and why. If the results don’t support your hypothesis then the discussion should consider why this might have happened. • a data statement stating where any data or scripts you used or generated may be found (this could be in an appendix or in the gitlab repository). CourseNana.COM

In total your experiment write up (this includes, tables and graphs of summarised results but not appendices of raw data or scripts) should take up at most three sides of A4 at a sensible font size (12pt is a sensible font size, we won’t be measuring font size but you will lose marks if we can’t read your report comfortably because the letters are so small). You can find a template report.tex for your report in the lab5 folder. You will need to pull from upstream to get the most up-to-date version of this (see instructions on Blackboard). When you have written it please upload your report as a PDF to Blackboard. CourseNana.COM

What Makes a Knapsack Problem Hard for Branch and Bound?

We’re not assessing this, but will include discussion of an experiment in our sample answers and this might be assessed in the semester 2 exam. The question of what makes a Knapsack problem hard for branch and bound is quite complex. Obviously, in the worst case, it performs no better than enumeration but in many cases, as you should have seen, it performs much better than enumeration. So what makes a knapsack instance cause branch and bound to behave more or less like enumeration? You might want to read up on weakly correlated knapsack instances to give you some ideas here and see if you come up with the same answers we will give in the lab sample answers. CourseNana.COM

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